PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID KFK34671.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Arabideae; Arabis
Family Trihelix
Protein Properties Length: 312aa    MW: 35241.1 Da    PI: 10.1262
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
KFK34671.1genomeMPIPBRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix50.84.3e-1640126186
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 +W++  v  L+ea++ ++   +r+klk+++We+v+k++     +++  ++++qCk+k+e+++kry+ + ++      ++ s +p++++l+
  KFK34671.1  40 EWSEGAVSSLLEAYETKWVLRNRAKLKGQDWEDVAKHVssrtNQTKSPKTQTQCKNKIESMKKRYRSESATTTT---PDGSCWPLYSRLD 126
                 5*************************************9888888889999*****************999996...45569*****998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.8E-1938128No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MEEGESKQEN PQPLNTVPNH DNSSLKKPSV SVVDRLKRDE WSEGAVSSLL EAYETKWVLR  60
NRAKLKGQDW EDVAKHVSSR TNQTKSPKTQ TQCKNKIESM KKRYRSESAT TTTPDGSCWP  120
LYSRLDHLLR GTPSSSLQPQ PQPQAVVPLN CSVPLLLLEP PSPLVAPPSQ PQISHGSNGV  180
NKTPKEDGFK TEKYPATEMD TDSSTPVISR DKAKMRPKKK VKTRRYREEK KEEEIAGSIR  240
WLAEVVMRTE RARMETMKEI EKMRGEAEVK RGEIDLKRTE IMANTQIEIA RLFAVAVSGH  300
KGVDSSLRIG RN
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006403581.11e-160hypothetical protein EUTSA_v10010575mg
TrEMBLA0A087GXR90.0A0A087GXR9_ARAAL; Uncharacterized protein
STRINGfgenesh2_kg.5__1832__AT3G54390.11e-152(Arabidopsis lyrata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM98592533
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.11e-132sequence-specific DNA binding transcription factors